BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D05LP1|AL427305
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1393 1645 0.0
>3x_Contig1393
Length = 6980
Score = 1645 bits (825), Expect = 0.0
Identities = 870/887 (98%), Gaps = 4/887 (0%)
Strand = Plus / Plus
Query: 1 atctattggtactgttcttggagccagtnctgttctcactatttttgaatcttcggcaac 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2359 atctattggtactgttcttggagccagttctgttctcactatttttgaatcttcggcaac 2418
Query: 61 cactaagttataccaatatttgcatccgattaacatggataaagagtacgagtcactaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2419 cactaagttataccaatatttgcatccgattaacatggataaagagtacgagtcactaat 2478
Query: 121 tcacgatactagtttcctaagaaatcattttagtggaaagatattgcgtgatttgttaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 tcacgatactagtttcctaagaaatcattttagtggaaagatattgcgtgatttgttaga 2538
Query: 181 aatctacaacgaatcctttttgatctcctacattcctacatttgcagttagcatactcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 aatctacaacgaatcctttttgatctcctacattcctacatttgcagttagcatactcgc 2598
Query: 241 attgatcatcgcattcaagctattcatttcctgcgataaagaagttacagaaacgaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 attgatcatcgcattcaagctattcatttcctgcgataaagaagttacagaaacgaaaga 2658
Query: 301 cgactcatccgattcaagttgaaagagtcaaattccactttatagacataaacaagttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2659 cgactcatccgattcaagttgaaagagtcaaattccactttatagacataaacaagttgt 2718
Query: 361 gtaattttaacgaaatgattcttattcacaggtatatttcatgtatcttgcgtcagttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2719 gtaattttaacgaaatgattcttattcacaggtatatttcatgtatcttgcgtcagtaac 2778
Query: 421 cagatggtaagatcgaatccaaaggatcttcatgaggattgaaacggtgcattgtatccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2779 cagatggtaagatcgaatccaaaggatcttcatgaggattgaaacggtgcattgtatccc 2838
Query: 481 agtcgatacctactttctggcattccatgagacaatcctcactaataaatggctcgtact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2839 agtcgatacctactttctggcattccatgagacaatcctcactaataaatggctcgtact 2898
Query: 541 ggtatcccaaaaagcacatgatcatggtgttgataaggtcttgcgacagtatgctcttca 600
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2899 ggtatcccatgaagcacatgatcatggtgttgataaggtcttgcgacagtatgctcttca 2958
Query: 601 ggtagaacaatctaatggcga--sacatggctttacatgcgatagggatcggtacgcctg 658
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2959 ggtagaacaatctaatggcgaagcacatggctttacatgcgatagggatcggtacgcctg 3018
Query: 659 cgtaacctgtacatagtcccggtaaaaccagttgttctgtttcacttggagggaagtgta 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3019 cgtaacctgtacatagtcccggtaaaaccagttgttctgtttcacttggagggaagtgta 3078
Query: 719 a-gcattccacgtaacgtcaaatacgattctatacccggaatggactggatctcgacggt 777
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3079 acgcattccacgtaacgtcaaatacgattctatacccggaatggactggatctcgacggt 3138
Query: 778 cgtwatctggaaccmccsgtgtcacaacasttggtatatgtwaaadgtactggaattggt 837
||| |||||||||| || ||||||||||| ||||||||||| ||| ||||||||||||||
Sbjct: 3139 cgtaatctggaaccaccggtgtcacaacagttggtatatgtaaaaggtactggaattggt 3198
Query: 838 ctctactaaactgattyaagggaattacagtgc-attcgtcacagga 883
|||||||||||||||| |||||||| ||||||| |||||||||||||
Sbjct: 3199 ctctactaaactgattcaagggaatcacagtgcaattcgtcacagga 3245
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4964
Number of Sequences: 1807
Number of extensions: 4964
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)